Jinfeng Chen

Introduction:

Jinfeng Chen joined the Stajich and Wessler Laboratories in February 2013. He completed his Ph.D in Genetics from the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences in 2012 working on comparative genomics of Foxtail millet, Rice and related Oryza species.

Education:

  • 2006-2012 Ph.D. in Genetics Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China. Advisor: Dr. Mingsheng Chen
  • 2004-2006 M.S. in Biochemistry and Molecular Biology College of Life Science, Northwest A&F University, Shaanxi, China. Advisor: Dr. Shiheng Tao
  • 2000-2004 B.S. in Biotechnology College of Life Science, Northwest A&F University, Shaanxi, China.

Publications:

  1. Lu L§, Chen J§, Robb SM, Okumoto Y, Monden Y, Naito K, Stajich JE, Wessler SR. Massive amplification of TEs in nature occurs in the presence of normal genome surveillance. PNAS. 2017; in press.
  2. Chen, J., Huang, Q., Guo, D., Wang, J., Lang, Y., et al and Chen, M. (2013). Whole Genome Sequencing of Oryza brachyantha Reveals Mechanisms Underlying Oryza Genome Evolution. Nature Communications 4:1595.
  3. Gao, D., Chen, J., Chen, M., Meyers, B. C., and Jackson, S. (2012). A Highly Conserved, Small LTR Retrotransposon that Preferentially Targets Genes in Grass Genomes. PLoS One 7, e32010.
  4. Wang, C*., Chen, J*., Zhi, H., Yang, L., Li, W., Wang, Y., Li, H., Zhao, B., Chen, M., and Diao, X. (2010). Population genetics of foxtail millet and its wild ancestor. BMC Genet 11, 90. (*equal contribution)
  5. Lu, F., Ammiraju, J. S., Sanyal, A., Zhang, S., Song, R., Chen, J., Li, G., Sui, Y., Song, X., Cheng, Z., de Oliveira, A. C., Bennetzen, J. L., Jackson, S., Wing, R. A., and Chen, M. (2009). Comparative sequence analysis of the MONOCULM1 orthologous regions in fourteen Oryza genomes. Proc Natl Acad Sci USA 106, 2071-2076.
  6. Chen, J., Lu, F., Chen, S., and Tao, S. (2006). Significant positive correlation between the recombination rate and GC content in the human pseudoautosomal region. Genome 49, 413-419.